Recent Staff Papers and Invited Talks


Journals

Borovecki F, Lovrecic L, Zhou J, Jeong H, Then F, Rosas HD, Hersch SM, Hogarth P, Bouzou B, Jensen RV, Krainc D. (2005) 'Genome-wide expression profiling of human blood reveals biomarkers for Huntington's disease'. Proc Natl Acad Sci U S A. 2005 Aug 2;102(31):11023-8.

Clark, T., Martin, S. and Liefeld, T. (2004) ‘Globally Distributed Object Identification for Biological Knowledge Bases’. Briefings in Bioinformatics, Vol. 5(1) pp. 59-70.

Bouzou, B. and F. Pfl à ¼ger (2003) "Biospecific properties of random copolymers, 1. Monte Carlo simulation of the radical random terpolymerization." (2003) Macromolecular Theory and Simulations, 12, 243-250.

Bouzou, B. and F. Pfl à ¼ger (2003) ‘Biospecific properties of random copolymers, 2. Monte Carlo simulation of random methacrylate based terpolymers’. Macromolecular Theory and Simulations, 12, 251-258.

Ficenec, D., Osborne, M., Pradines, J., Richards, D., Felciano, R., Cho, R., Chen, R., Liefeld, T., Owen, J.J., Ruttenberg, A., Reich, C., Horvath, J., and Clark, T. (2003) ‘Computational Knowledge Integration in Biopharmaceutical Research’ Briefings in Bioinformatics, Vol. 4(3), pp 260-278.

Clark, T. (2003) ‘Identity and Interoperability in Bioinformatics’. Briefings in Bioinformatics, Vol. 4(1), pp 4-6.

Invited Talks

Clark, T. (2005) ‘Problems in Semantic Integration of Neurodegeneration Research’. Invited talk, Microsoft Research, Redmond WA, March 28, 2005.

Clark, T. and Kinoshita, J. (2004) ‘A pilot knowledgebase of biological pathways important in Alzheimer Disease’. Invited talk, W3C Workshop on Semantic Web for Life Sciences, Cambridge, MA, October 27-28, 2004.

White Papers

Clark, T., Goodman, A., and Stubbs, C. (2004) ‘The Harvard Institute for Innovative Computing’. White paper prepared for the Harvard University Allston Task Force.

Trade press

Clark, T. (2005) ‘Looking Ahead: The Semantic Web in Life Science’. Genome Technology, Jan/Feb 2005, pp 23-24.

Clark, T. (2005) ‘Toward an Integrated Biology Knowledge Base’. Genome Technology, May/June 2005, pp 17-18.


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